Mitominer API: Hunting Down the Connection Between Mitochondria Dysfunction and Disease

Greg Bates, November 14th, 2012

MitoMinerMitominer is an integrated priteomics database for mitochondria. The open source Mitominer API runs on Perl programs, and provides access to client libraries in Java, Perl and Python. The API covers nine data categories from proteins to gene ontology.

Mitominer is useful in investigating changes in the proteome may contribute to mitochondrial dysfunction and its relationship to certain cancers and other diseases, according to the Oxford Journal Nucleic Acids Research:

MitoMiner (http://mitominer.mrc-mbu.cam.ac.uk/) is a data warehouse for the storage and analysis of mitochondrial proteomics data gathered from publications of mass spectrometry and green fluorescent protein tagging studies. In MitoMiner, these data are integrated with data from UniProt, Gene Ontology, Online Mendelian Inheritance in Man, HomoloGene, Kyoto Encyclopaedia of Genes and Genomes and PubMed. The latest release of MitoMiner stores proteomics data sets from 46 studies covering 11 different species from eumetazoa, viridiplantae, fungi and protista.

Mitominer provides predefined template queries, while those who create an account can create their own template queries. The database warehouse also provides an extensive set of 9 tutorials to get up and running.

Both comments and pings are currently closed.

3 Responses to “Mitominer API: Hunting Down the Connection Between Mitochondria Dysfunction and Disease”

November 15th, 2012
at 2:42 am
Comment by: Moncler Ropa

Mira lo que encuentro. Aquí hay tantas opciones de comprar mujer Moncler Baratas y Moncler Ropa. Lo más importante es que se venden sin gasto de envío. Además, el precio de los productos no es alto. Con menos de €60 compro dos productos. No puedo creerlo. Pero es verdadero.

December 5th, 2012
at 9:16 pm
Comment by: mGOASVM: Multi-label protein subcellular localization based on gene ontology … | Leads daily

[...] Mitominer API: Hunting Down the Connection Between Mitochondria … In MitoMiner, these data are integrated with data from UniProt, Gene Ontology, Online Mendelian Inheritance in Man, HomoloGene, Kyoto Encyclopaedia of Genes and Genomes and PubMed. The latest release of MitoMiner stores proteomics data sets from … Read more on ProgrammableWeb (blog) [...]

December 11th, 2012
at 6:02 am
Comment by: Clarifying off-target effects for torcetrapib using network pharmacology and … | AI SEO Group

[...] and PubMed. The latest release of MitoMiner stores proteomics data sets from … Read more on ProgrammableWeb (blog) This entry was posted in GeneOntology and tagged …, Clarifying, Effects, Network, offtarget, [...]

Follow the PW team on Twitter

ProgrammableWeb
APIs, mashups and code. Because the world's your programmable oyster.

John Musser
Founder, ProgrammableWeb

Adam DuVander
Executive Editor, ProgrammableWeb. Author, Map Scripting 101. Lover, APIs.